Difference between revisions of "SspB"

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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 +
* a ''[[sspB]]'' mutant is sensitive to ionizing radiation {{PubMed|24123749}}
  
 
=== Database entries ===
 
=== Database entries ===
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=== Additional information===
 
=== Additional information===
 
 
  
  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sspB_1050031_1050234_-1 sspB] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sspB_1050031_1050234_-1 sspB] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigG]] {{PubMed|15699190}}
+
* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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=References=
 
=References=
<pubmed>16707666,1900507,2456528,3009398,11092849,7608092,15458366, 19542328 8755877 23064347 3087950 3125155 24163345</pubmed>
+
<pubmed>16707666,1900507,2456528,3009398,11092849,7608092,15458366, 19542328 8755877 23064347 3087950 3125155 24163345 24123749</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:35, 20 December 2013

  • Description: small acid-soluble spore protein (major beta-type SASP)

Gene name sspB
Synonyms
Essential no
Product small acid-soluble spore protein (major beta-type SASP)
Function protection of spore DNA
Gene expression levels in SubtiExpress: sspB
MW, pI 6 kDa, 4.791
Gene length, protein length 201 bp, 67 aa
Immediate neighbours yheF, yheE
Sequences Protein DNA DNA_with_flanks
Genetic context
SspB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SspB expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigG regulon, SpoVT regulon

The gene

Basic information

  • Locus tag: BSU09750

Phenotypes of a mutant

  • a sspB mutant is sensitive to ionizing radiation PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: alpha/beta-type SASP family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:
    • the mRNA half-life is about 13 min PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion: GP996 (cat, based on pSG1151), available in the Stülke lab
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References