Difference between revisions of "SspB"
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===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
+ | * a ''[[sspB]]'' mutant is sensitive to ionizing radiation {{PubMed|24123749}} | ||
=== Database entries === | === Database entries === | ||
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=== Additional information=== | === Additional information=== | ||
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− | |||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sspB_1050031_1050234_-1 sspB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sspB_1050031_1050234_-1 sspB] {{PubMed|22383849}} | ||
− | * '''Sigma factor:''' [[SigG]] {{PubMed|15699190}} | + | * '''[[Sigma factor]]:''' [[SigG]] {{PubMed|15699190}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
− | <pubmed>16707666,1900507,2456528,3009398,11092849,7608092,15458366, 19542328 8755877 23064347 3087950 3125155 24163345</pubmed> | + | <pubmed>16707666,1900507,2456528,3009398,11092849,7608092,15458366, 19542328 8755877 23064347 3087950 3125155 24163345 24123749</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 16:35, 20 December 2013
- Description: small acid-soluble spore protein (major beta-type SASP)
Gene name | sspB |
Synonyms | |
Essential | no |
Product | small acid-soluble spore protein (major beta-type SASP) |
Function | protection of spore DNA |
Gene expression levels in SubtiExpress: sspB | |
MW, pI | 6 kDa, 4.791 |
Gene length, protein length | 201 bp, 67 aa |
Immediate neighbours | yheF, yheE |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09750
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: alpha/beta-type SASP family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P04832
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: sspB PubMed
- Regulation:
- Additional information:
- the mRNA half-life is about 13 min PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion: GP996 (cat, based on pSG1151), available in the Stülke lab
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References