Difference between revisions of "Main Page"
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| − | <big>'''Paper of the month: | + | <big>'''Paper of the month: December 2013'''</big> |
| − | * | + | * Intercellular signaling requires the transfer of information between two different cells. Now, [http://www.ncbi.nlm.nih.gov/pubmed/24243021 Mastny et al.] from the labs of [[David Rudner]] and Tim Clausen show how the protease [[CtpB]] is activated by substrate binding to cleave off the inhibitory domain of [[SpoIVFA]] to allow ultimately allow processing of pro-[[SigK]] by [[SpoIVFB]]. |
| − | * '''Relevant ''Subti''Wiki pages:''' [[ | + | * '''Relevant ''Subti''Wiki pages:''' [[David Rudner]], [[sporulation]], [[CtpB]], [[SpoIVB]], [[SpoIVFA]], [[SpoIVFB]] |
| − | <pubmed> | + | <pubmed> 24243021 </pubmed> |
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* [[Previous papers of the month]] | * [[Previous papers of the month]] | ||
Revision as of 10:22, 3 December 2013
Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!
Contact: General Microbiology, University of Göttingen, send mail
Important note: SubtiWiki will not be available from Thursday (November 14) to Monday (November 18) due to server maintenance!
Upcoming events:
- The 6th European Spores Conference will be held in London from April 9 to April 11, 2014. The meeting will be organized by Simon Cutting and Imrich Barak, website, contact
- The next European BACELL meeting will take place in Bratislava from April 29 to April 30, 2014. The meeting will be organized by Imrich Barak, website, contact
- Past conferences
New: Subtiwiki is now on Facebook - please give it a +1!
Now online: A new description of SubtiWiki and its acompanying modules in the 2014 Database issue of Nucleic Acids Research
Raphael H Michna, Fabian M Commichau, Dominik Tödter, Christopher P Zschiedrich, Jörg Stülke
SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information.
Nucleic Acids Res: 2014, 42(Database issue);D692-8
[PubMed:24178028]
[WorldCat.org]
[DOI]
(I p)
Paper of the month: December 2013
- Intercellular signaling requires the transfer of information between two different cells. Now, Mastny et al. from the labs of David Rudner and Tim Clausen show how the protease CtpB is activated by substrate binding to cleave off the inhibitory domain of SpoIVFA to allow ultimately allow processing of pro-SigK by SpoIVFB.
- Relevant SubtiWiki pages: David Rudner, sporulation, CtpB, SpoIVB, SpoIVFA, SpoIVFB
Markus Mastny, Alexander Heuck, Robert Kurzbauer, Anja Heiduk, Prisca Boisguerin, Rudolf Volkmer, Michael Ehrmann, Christopher D A Rodrigues, David Z Rudner, Tim Clausen
CtpB assembles a gated protease tunnel regulating cell-cell signaling during spore formation in Bacillus subtilis.
Cell: 2013, 155(3);647-58
[PubMed:24243021]
[WorldCat.org]
[DOI]
(I p)
New procedure for account creation:
- Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just send me a mail. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active.
- Please remember that all members of the Bacillus community are invited to create accounts and to contribute to SubtiWiki!
News in SubtiWiki:
- April 2013: SubtiWiki uses a new, faster Mediawiki platform! The times for page access are significantly reduced. Enjoy!
- March 2013: updated Excel files that map all genes to categories and regulons as well as the general updated identity mapping of all genes were uploaded.
- October 2012: the essential genes have been categorized
- September 2012: 300 mutant strains available at the BGSC were added to the corresponding gene pages
- August 2012: SubtiExpress, the new compagnon of SubtiWiki devoted to gene expression is online! Try it out!
- April 2012: Links for expression data under 104 different conditions (based on Nicolas et al., 2012) have been added to the expression section of the individual gene pages
- April 2011: SubtInteract, a presentation of protein-protein interactions in B. subtilis, is online!
- December 2010: SubtiCellPublisher allows the conversion of CellDesigner diagrams to navigatable presentations in the style of SubtiPathways
- December 2010: all genes are linked to regulons, and the pages of the regulons provide an overview on all genes that are members of this specific regulon.
- December 2010: all genes/proteins are linked to categories, and the pages of the categories provide an overview on all genes/proteins that are members of this specific category.
| Genes (examples) | Additional pages |
| spo0A | SubtiPathways |
| glnA | SubtInteract |
| rny | SubtiExpress |
| psdA | Regulons |
| pckA | methods |
| dnaA | metabolism |
| rnpA | categories |
| sigB | genome-wide analyses |
| ptkA | list of plasmids |
| mreC | labs working on Bacillus |
| ccpA | the people behind SubtiWiki |
| sr1 | template |
Publications describing SubtiWiki and SubtiPathways:
