Difference between revisions of "SspA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytcI]]'', ''[[thiI]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytcI]]'', ''[[thiI]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29570 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29570 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29570 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU29570 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU29570 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU29570 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:sspA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:sspA_context.gif]]

Revision as of 11:01, 14 May 2013

  • Description: small acid-soluble spore protein (major alpha-type SASP)

Gene name sspA
Synonyms
Essential no
Product small acid-soluble spore protein (major alpha-type SASP)
Function protection of spore DNA
Gene expression levels in SubtiExpress: sspA
MW, pI 6 kDa, 4.731
Gene length, protein length 207 bp, 69 aa
Immediate neighbours ytcI, thiI
Sequences Protein DNA DNA_with_flanks
Genetic context
SspA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SspA expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigG regulon, SpoVT regulon

The gene

Basic information

  • Locus tag: BSU29570

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: alpha/beta-type SASP family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2BZ0 (82% identity, 89% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
    • 1S109 (no resistance), available at BGSC
    • 1S111 (no resistance), PubMed, available at BGSC
    • 1S112 (no resistance), PubMed, available at BGSC
    • 1S113 (no resistance), PubMed, available at BGSC
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References