Difference between revisions of "YdaS"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mntH]]'', ''[[ydaT]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mntH]]'', ''[[ydaT]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04370 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04370 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04370 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04370 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04370 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04370 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ydaS_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ydaS_context.gif]]

Revision as of 09:30, 14 May 2013

  • Description: general stress protein

Gene name ydaS
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydaS
MW, pI 8 kDa, 12.193
Gene length, protein length 255 bp, 85 aa
Immediate neighbours mntH, ydaT
Sequences Protein DNA DNA_with_flanks
Genetic context
YdaS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdaS expression.png
























Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU04370

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513] [WorldCat.org] [DOI] (P p)