Difference between revisions of "Spo0E"
(→Original Publications) |
|||
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || initiation of sporulation | |style="background:#ABCDEF;" align="center"|'''Function''' || initiation of sporulation | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13640 spo0E] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Spo0E Spo0E] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Spo0E Spo0E] | ||
| Line 26: | Line 26: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvA]]'', ''[[eag]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvA]]'', ''[[eag]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13640 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13640 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13640 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spo0E_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:spo0E_context.gif]] | ||
Revision as of 12:40, 13 May 2013
- Description: Spo0A-P phosphatase, control of the phosphorelay
| Gene name | spo0E |
| Synonyms | |
| Essential | no |
| Product | Spo0A-P phosphatase |
| Function | initiation of sporulation |
| Gene expression levels in SubtiExpress: spo0E | |
| Interactions involving this protein in SubtInteract: Spo0E | |
| Function and regulation of this protein in SubtiPathways: Phosphorelay | |
| MW, pI | 9 kDa, 6.483 |
| Gene length, protein length | 255 bp, 85 aa |
| Immediate neighbours | ykvA, eag |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
protein modification, phosphorelay
This gene is a member of the following regulons
SigB regulon, AbrB regulon, Rok regulon
The gene
Basic information
- Locus tag: BSU13640
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: spo0E family (according to Swiss-Prot)
- Paralogous protein(s): YnzD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P05043
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spo0E PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Tony Wilkinson, York University, U.K. homepage
Your additional remarks
References
Reviews
Original Publications
Additional publications: PubMed
