Difference between revisions of "RpoC"
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'''Additional publications:''' {{PubMed|20817769}} | '''Additional publications:''' {{PubMed|20817769}} | ||
<pubmed>7657605,12486038,10675340,7592585, 19735077,18763711, 19680289 22517742</pubmed> | <pubmed>7657605,12486038,10675340,7592585, 19735077,18763711, 19680289 22517742</pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 09:22, 1 October 2012
- Description: RNA polymerase beta' subunit
Gene name | rpoC |
Synonyms | |
Essential | yes PubMed |
Product | RNA polymerase beta' subunit |
Function | transcription |
Gene expression levels in SubtiExpress: rpoC | |
Interactions involving this protein in SubtInteract: RpoC | |
MW, pI | 133 kDa, 8.863 |
Gene length, protein length | 3597 bp, 1199 aa |
Immediate neighbours | rpoB, ybxF |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
transcription, essential genes, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01080
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1) (according to Swiss-Prot)
- Protein family: RNA polymerase beta' chain family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- phosphorylated on Arg-335 and Arg-803 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- RpoA-RpoB-RpoC PubMed
- SigA-(RpoB-RpoC) PubMed, SigB-(RpoB-RpoC)
- SigD-(RpoB-RpoC), SigE-(RpoB-RpoC)
- SigF-(RpoB-RpoC), SigG-(RpoB-RpoC)
- SigH-(RpoB-RpoC), SigI-(RpoB-RpoC)
- SigK-(RpoB-RpoC), SigL-(RpoB-RpoC)
- SigM-(RpoB-RpoC), SigV-(RpoB-RpoC)
- SigW-(RpoB-RpoC), SigX-(RpoB-RpoC)
- SigY-(RpoB-RpoC), SigZ-(RpoB-RpoC)
- Xpf-(RpoB-RpoC), YlaC-(RpoB-RpoC)
- YvrHa-RpoC PubMed
- Localization: membrane associated PubMed
Database entries
- Structure:
- UniProt: P37871
- KEGG entry: [2]
- E.C. number: 2.7.7.6
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
Additional publications: PubMed