XynD

• Description: arabinoxylan arabinofuranohydrolase
  
  

Gene name	xynD
Synonyms
Essential	no
Product	arabinoxylan arabinofuranohydrolase
Function	arabinoxylan degradation
Gene expression levels in SubtiExpress: xynD
MW, pI	54 kDa, 8.031
Gene length, protein length	1539 bp, 513 aa
Immediate neighbours	xynC, yngA
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

• Locus tag: BSU18160

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity: Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides (according to Swiss-Prot)

• Protein family: glycosyl hydrolase 43 family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • extracellular (signal peptide) PubMed

Database entries

• Structure: 3C7O

• UniProt: Q45071

• KEGG entry: [2]

• E.C. number: 3.2.1.55

Expression and regulation

• Operon: xynD-xynC PubMed

• Expression browser: xynD PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:
  • AbrB: transcription repression PubMed

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Additional publications: PubMed