Difference between revisions of "SigH"

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* '''Description:''' [[RNA polymerase]] [[sigma factor]] SigH <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[transcription]] of early stationary phase genes <br/>(sporulation, competence)
 
|style="background:#ABCDEF;" align="center"|'''Function''' || [[transcription]] of early stationary phase genes <br/>(sporulation, competence)
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU00980 sigH]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/SigH SigH]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/SigH SigH]

Revision as of 14:20, 6 August 2012


Gene name sigH
Synonyms spo0H
Essential no
Product RNA polymerase sigma factor SigH
Function transcription of early stationary phase genes
(sporulation, competence)
Gene expression levels in SubtiExpress: sigH
Interactions involving this protein in SubtInteract: SigH
MW, pI 25 kDa, 5.146
Gene length, protein length 654 bp, 218 aa
Immediate neighbours yacP, rpmGB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SigH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SigH expression.png

























Categories containing this gene/protein

transcription, sigma factors and their control

This gene is a member of the following regulons

AbrB regulon

The SigH regulon

The gene

Basic information

  • Locus tag: BSU00980

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sigma-70 factor family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: sigH (DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Michiel J L de Hoon, Patrick Eichenberger, Dennis Vitkup
Hierarchical evolution of the bacterial sporulation network.
Curr Biol: 2010, 20(17);R735-45
[PubMed:20833318] [WorldCat.org] [DOI] (I p)

The SigH regulon

Original Publications