Difference between revisions of "RapI"
(→Extended information on the protein) |
|||
Line 47: | Line 47: | ||
* '''Locus tag:''' BSU05010 | * '''Locus tag:''' BSU05010 | ||
+ | |||
+ | [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rapI_547306_548481_1 Expression] | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === |
Revision as of 14:18, 24 January 2012
- Description: response regulator aspartate phosphatase, antagonist of ImmR
Gene name | rapI |
Synonyms | yddL |
Essential | no |
Product | response regulator aspartate phosphatase |
Function | control of transfer of the mobile genetic element ICEBs1 |
Interactions involving this protein in SubtInteract: RapI | |
MW, pI | 46 kDa, 5.054 |
Gene length, protein length | 1173 bp, 391 aa |
Immediate neighbours | yddK, phrI |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
protein modification, transcription factors and their control, quorum sensing, mobile genetic elements
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05010
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binds ImmR and inhibits its activity, this results in induction of the genes for the transfer of the mobile genetic element ICEBs1 PubMed
- Protein family: RAP family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: binding of PhrI indicates that neighbour cells do already contain the genetic element ICEBs1, this results in inactivation of RapI PubMed
Database entries
- Structure:
- UniProt: P96649
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References