Difference between revisions of "YbfP"
(→This gene is a member of the following regulons) |
(→Expression and regulation) |
||
| Line 99: | Line 99: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[ybfO]]-[[ybfP]]'' {{PubMed|20817675}} | + | * '''Operon:''' |
| + | ** ''[[ybfO]]-[[ybfP]]'' {{PubMed|20817675}} | ||
| + | ** ''[[ybfO]]-[[ybfP]]-[[ybfQ]]'' {{PubMed|12207695}} | ||
* '''[[Sigma factor]]:''' [[SigW]] {{PubMed|12207695}} | * '''[[Sigma factor]]:''' [[SigW]] {{PubMed|12207695}} | ||
| Line 108: | Line 110: | ||
** [[AbrB]]: transcription repression {{PubMed|20817675}} | ** [[AbrB]]: transcription repression {{PubMed|20817675}} | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 17:31, 17 May 2011
- Description: similar to transcription regulator (AraC family)
| Gene name | ybfP |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 34 kDa, 6.285 |
| Gene length, protein length | 885 bp, 295 aa |
| Immediate neighbours | ybfO, ybfQ |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
transcription factors and their control, cell envelope stress proteins (controlled by SigM, W, X, Y)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02320
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O31456
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Onuma Chumsakul, Hiroki Takahashi, Taku Oshima, Takahiro Hishimoto, Shigehiko Kanaya, Naotake Ogasawara, Shu Ishikawa
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
Nucleic Acids Res: 2011, 39(2);414-28
[PubMed:20817675]
[WorldCat.org]
[DOI]
(I p)
