Difference between revisions of "SigH"

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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
{{SubtiWiki regulon|[[AbrB regulon]]}}
 
{{SubtiWiki regulon|[[AbrB regulon]]}}
 
+
=The [[SigH regulon]]=
 
=The gene=
 
=The gene=
  
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* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''
 
=== Genes controlled by SigH ===
 
''[[spoIIAA]]-[[spoIIAB]]-[[sigF]]'', ''[[spoVG]]'', ''[[rapI]]-[[phrI]]''
 
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===
Line 135: Line 132:
 
==Reviews==
 
==Reviews==
 
<pubmed>20833318 </pubmed>
 
<pubmed>20833318 </pubmed>
 +
==The [[SigH regulon]]==
 +
<pubmed>12169614,</pubmed>
 
==Original Publications==
 
==Original Publications==
<pubmed>1391042,3123466,2122453,12169614,3127379,2502532,6405278,2118512,2509422,1904128,3007003, 2500529,9733708,11377871,8600030,7592498, 1898930  20154131 </pubmed>
+
<pubmed>1391042,3123466,2122453,3127379,2502532,6405278,2118512,2509422,1904128,3007003, 2500529,9733708,11377871,8600030,7592498, 1898930  20154131 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:44, 10 December 2010

Gene name sigH
Synonyms spo0H
Essential no
Product RNA polymerase sigma factor SigH
Function transcription of early stationary phase genes
(sporulation, competence)
MW, pI 25 kDa, 5.146
Gene length, protein length 654 bp, 218 aa
Immediate neighbours yacP, rpmGB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SigH context.gif
This image was kindly provided by SubtiList




Categories containing this gene/protein

transcription, sigma factors and their control

This gene is a member of the following regulons

AbrB regulon

The SigH regulon

The gene

Basic information

  • Locus tag: BSU00980

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sigma-70 factor family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: sigH (DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Michiel J L de Hoon, Patrick Eichenberger, Dennis Vitkup
Hierarchical evolution of the bacterial sporulation network.
Curr Biol: 2010, 20(17);R735-45
[PubMed:20833318] [WorldCat.org] [DOI] (I p)

The SigH regulon

Original Publications