Difference between revisions of "TapA"

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= Categories containing this gene/protein =
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{{SubtiWiki category|[[biofilm formation]]}},
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{{SubtiWiki category|[[membrane proteins]]}}
 
=The protein=
 
=The protein=
  

Revision as of 23:09, 30 November 2010

  • Description: required for the formation of biofilms and fruiting bodies

Gene name yqxM
Synonyms yqhD
Essential no
Product unknown
Function biofilm formation
Regulation of this protein in SubtiPathways:
Biofilm
MW, pI 28 kDa, 6.677
Gene length, protein length 759 bp, 253 aa
Immediate neighbours sipW, yqzG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqxM context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU24640

Phenotypes of a mutant

The mutants are able to form a biofilm in the presence of D-amino acids PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

biofilm formation, membrane proteins

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References