Difference between revisions of "YdjG"

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(References)
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* '''[[Sigma factor]]:''' [[SigW]] {{PubMed|11454200}}
 
* '''[[Sigma factor]]:''' [[SigW]] {{PubMed|11454200}}
  
* '''Regulation:''' induced by alkaline shock ([[SigW]]) {{PubMed|11454200}}
+
* '''Regulation:'''  
 +
** induced by alkaline shock ([[SigW]]) {{PubMed|11454200}}
 +
** repressed during logarithmic phase ([[AbrB]]) {{PubMed|18840696}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[AbrB]]: transcription repression {{PubMed|18840696}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
<pubmed> 11454200 </pubmed>  
+
<pubmed> 11454200 18840696</pubmed>  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 22:29, 11 December 2009

  • Description: unknown

Gene name ydjG
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 38 kDa, 5.378
Gene length, protein length 1023 bp, 341 aa
Immediate neighbours pspA, ydjH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdjG context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU06190

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Allison V Banse, Arnaud Chastanet, Lilah Rahn-Lee, Errett C Hobbs, Richard Losick
Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2008, 105(40);15547-52
[PubMed:18840696] [WorldCat.org] [DOI] (I p)

T Wiegert, G Homuth, S Versteeg, W Schumann
Alkaline shock induces the Bacillus subtilis sigma(W) regulon.
Mol Microbiol: 2001, 41(1);59-71
[PubMed:11454200] [WorldCat.org] [DOI] (P p)