Difference between revisions of "YdjG"
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* '''[[Sigma factor]]:''' [[SigW]] {{PubMed|11454200}} | * '''[[Sigma factor]]:''' [[SigW]] {{PubMed|11454200}} | ||
− | * '''Regulation:''' induced by alkaline shock ([[SigW]]) {{PubMed|11454200}} | + | * '''Regulation:''' |
+ | ** induced by alkaline shock ([[SigW]]) {{PubMed|11454200}} | ||
+ | ** repressed during logarithmic phase ([[AbrB]]) {{PubMed|18840696}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
+ | ** [[AbrB]]: transcription repression {{PubMed|18840696}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
Line 117: | Line 120: | ||
=References= | =References= | ||
− | <pubmed> 11454200 </pubmed> | + | <pubmed> 11454200 18840696</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 22:29, 11 December 2009
- Description: unknown
Gene name | ydjG |
Synonyms | |
Essential | no |
Product | unknown |
Function | unknown |
MW, pI | 38 kDa, 5.378 |
Gene length, protein length | 1023 bp, 341 aa |
Immediate neighbours | pspA, ydjH |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU06190
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O34434
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Allison V Banse, Arnaud Chastanet, Lilah Rahn-Lee, Errett C Hobbs, Richard Losick
Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2008, 105(40);15547-52
[PubMed:18840696]
[WorldCat.org]
[DOI]
(I p)
T Wiegert, G Homuth, S Versteeg, W Schumann
Alkaline shock induces the Bacillus subtilis sigma(W) regulon.
Mol Microbiol: 2001, 41(1);59-71
[PubMed:11454200]
[WorldCat.org]
[DOI]
(P p)