Difference between revisions of "GerKA"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[gerKA]]-[[gerKC]]-[[gerKB]]'' (according to [http://dbtbs.hgc.jp/COG/prom/gerKACB.html DBTBS])
  
* '''[[Sigma factor]]:'''  
+
* '''[[Sigma factor]]:''' SigG {{PubMed|16707705}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed during sporulation ([[SigG]], [[SpoVT]]) {{PubMed|16707705}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[SpoVT]]: transcription repression {{PubMed|16707705}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  

Revision as of 19:03, 19 August 2009

  • Description: nutrient receptor

Gene name gerKA
Synonyms
Essential no
Product nutrient receptor
Function germination response to the combination of glucose,
fructose, aspartate, and KCl
MW, pI 60 kDa, 5.206
Gene length, protein length 1632 bp, 544 aa
Immediate neighbours yczF, gerKC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GerKA context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Locus tag: BSU03700

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References