yydK

yydK
168

similar to transcriptional regulator (GntR family)

Locus
BSU_40130
Molecular weight
27.13 kDa
Isoelectric point
5.19
Protein length
236 aaSequenceBlast
Gene length
711 bpSequenceBlast
Function
unknown
Product
transcriptional regulator (GntR family)
Essential
no
Synonyms
yydK
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2188 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,123,193  4,123,903
The protein
Protein family
GntR family of transcription factors
Domains
HTH gntR-type domain (aa 1-69) (according to UniProt)
Structure
3BWG (PDB)
Q45591 (AlphaFold)
Paralogous protein(s)
GmuR, NagR, TreR, GamR, FrlR
Expression and Regulation
Operons
Genes
yydK-yyzN
Description
PubMed
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yydK→yyzN

2025-03-16 16:17:18

Jstuelk

64

a50d8e2423c6e12fc20495c45bace1cc8661f915

AC7842819679C753415310CC2F5CE6AADF6406D4

Biological materials
Mutant
MGNA-B806 (yydK::erm), available at the NBRP B. subtilis, Japan
BKE40130 (yydK::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATACGCATTCCTCATTTAT,  downstream forward: _UP4_TAGGGCTCTTCACTACGGTA
BKK40130 (yydK::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATACGCATTCCTCATTTAT,  downstream forward: _UP4_TAGGGCTCTTCACTACGGTA
References
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59EBB1812BA939110BC00ACE30057AB987E61B30

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Time of last update: 2025-03-31 15:12:10

Author of last update: Melvin.boenninger