yoaJ

yoaJ
168

bacterial expansin, binds cellulose, required for the colonization of maize roots, putative cell wall hydrolase (N-acetylglucosamidase)

Locus
BSU_18630
Molecular weight
25.49 kDa
Isoelectric point
9.45
Protein length
232 aaSequenceBlast
Gene length
699 bpSequenceBlast
Function
interaction with plant roots
Product
expansin
Essential
no
Synonyms
yoaJ, EXLX1
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG4305 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,032,927  2,033,625
Phenotypes of a mutant
strongly reduced ability to colonize maize  roots PubMed
The protein
Protein family
expansin PubMed
Domains
Expansin-like EG45 domain (aa 58-127) (according to UniProt)
Structure
3D30 (PDB) PubMed
O34918 (AlphaFold)
Localization
extracellular PubMed
Expression and Regulation
Operons
Genes
yoaJ
Description
PubMed
Regulation
induced upon iron starvation (Fur) PubMed
Regulatory mechanism
Fur: repression, PubMed, in fur regulon
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yoaJ

2025-03-14 20:14:44

ghost

92

61d603e28fa56e14adc51f323763d3e2bd32d284

624A5280936065F93E1FEE45FE637EC60E9ED4E4

Biological materials
Mutant
MGNA-A839 (yoaJ::erm), available at the NBRP B. subtilis, Japan
BKE18630 (yoaJ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATTTGGTCCTCCTCAAA,  downstream forward: _UP4_TAAAAAATACGAAACAGCGG
BKK18630 (yoaJ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATTTGGTCCTCCTCAAA,  downstream forward: _UP4_TAAAAAATACGAAACAGCGG
References
Reviews
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Original Publications
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17094CBA2DDFB82B5FC064AADB85DAB60A15B2C0

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Time of last update: 2025-03-30 13:44:50

Author of last update: Jstuelk