yjdI

yjdI
168

similiar to Cys-tRNA(Pro) and Cys-tRNA(Cys) deacylase

Locus
BSU_12060
Molecular weight
17.12 kDa
Isoelectric point
8.76
Protein length
159 aaSequenceBlast
Gene length
480 bpSequenceBlast
Function
maturation of tRNA
Product
Cys-tRNA(Pro) and Cys-tRNA(Cys) deacylase
Essential
no
Synonyms
yjdI
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2606 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,277,686  1,278,165
The protein
Protein family
prolyl-tRNA editing family (single member, according to UniProt)
Structure
2DXA (PDB) (from E. coli, 44% identity)
O31650 (AlphaFold)
Expression and Regulation
Operons
Genes
yjdI
Description
PubMed
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yjdI

2025-03-11 11:17:57

Jstuelk

55

2e3fffa06a33287e8a762f11213538ab9a26e56a

D3FC3945F185D60513E8F5E6C8D4615C5F2481D2

Biological materials
Mutant
MGNA-A257 (yjdI::erm), available at the NBRP B. subtilis, Japan
BKE12060 (yjdI::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGTTTTCACCCACTATC,  downstream forward: _UP4_TAGATGCAGATATAGGGGAA
BKK12060 (yjdI::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGTTTTCACCCACTATC,  downstream forward: _UP4_TAGATGCAGATATAGGGGAA
References
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Page visits: 2362

Time of last update: 2025-04-02 18:01:05

Author of last update: Melvin.boenninger