yfiB

yfiB
168

similar to ABC transporter (ATP-binding protein)

Locus
BSU_08210
Molecular weight
63.77 kDa
Isoelectric point
8.93
Protein length
573 aaSequenceBlast
Gene length
1722 bpSequenceBlast
Function
unknown
Product
ABC transporter (ATP-binding protein)
Essential
no
Synonyms
yfiB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1132 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
893,904  895,625
The protein
Protein family
ABC transporter superfamily (according to UniProt)
Domains
has both a membrane-spanning and an ATP-binding domain PubMed
ABC transmembrane type-1 domain (aa 15-298) (according to UniProt)
ABC transporter domain (aa 330-563) (according to UniProt)
Structure
3QF4 (PDB) (YfiB-YfiC complex from Thermotoga maritima, 44% identity) PubMed
P54718 (AlphaFold)
Paralogous protein(s)
BmrC, YknU, YknV, YwjA, YfiC, BmrA, YgaD
Localization
cell membrane PubMed
Expression and Regulation
Operons
Genes
yfiB-yfiC
Description
PubMed
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yfiB→yfiC

2025-03-16 13:01:26

Jstuelk

74

4c57fdf34e3ec7eb7b03ff0d8072df76ee03fc27

8BC3C441B6D7A4146D2BF5E5541BE11627299F1B

Biological materials
Mutant
MGNA-C292 (yfiB::erm), available at the NBRP B. subtilis, Japan
BKE08210 (yfiB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTAAAAGCCTCCAAACC,  downstream forward: _UP4_TTCGGAAGGGAGGGGAGCGA
BKK08210 (yfiB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTAAAAGCCTCCAAACC,  downstream forward: _UP4_TTCGGAAGGGAGGGGAGCGA
References
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Time of last update: 2025-03-30 12:56:54

Author of last update: Jstuelk