ycgK

ycgK
168

similar to transcriptional regulator (LysR family)

Locus
BSU_03170
Molecular weight
36.25 kDa
Isoelectric point
7.28
Protein length
324 aaSequenceBlast
Gene length
975 bpSequenceBlast
Function
unknown
Product
transcriptional regulator (LysR family)
Essential
no
Synonyms
ycgK
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
341,492 → 342,466
The protein
Protein family
LysR family (according to UniProt)
Domains
HTH lysR-type domain (aa 1-58) (according to UniProt)
Structure
4X6G (PDB) (from Pseudomonas aeruginosa, 29% identity) PubMed
P94387 (AlphaFold)
Expression and Regulation
Operons
Genes
ycgK-cah-ycgL
Description
PubMed
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ycgK→ycgL

2025-03-27 14:31:07

Jstuelk

76

ab6bd4636d1fc5110090b1b0ce77491e89fa4b6d

B23BDB1B6636DD3E6BBB58391EB252FE951AC9F0

Biological materials
Mutant
MGNA-B990 (ycgK::erm), available at the NBRP B. subtilis, Japan
BKE03170 (ΔycgK::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTTCAGCCTCCATAGGTT,  downstream forward: _UP4_TAGAAAACAAAGACGAAACG
BKK03170 (ΔycgK::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTTCAGCCTCCATAGGTT,  downstream forward: _UP4_TAGAAAACAAAGACGAAACG
References
Research papers
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D28190620D5B834DD7F42822B835C6FE932FD8A5

Page visits: 1892

Time of last update: 2025-04-01 07:10:39

Author of last update: Melvin.boenninger