yabE

yabE
168

similar to cell wall binding protein

Locus
BSU_00400
Molecular weight
47.55 kDa
Isoelectric point
9.28
Protein length
437 aaSequenceBlast
Gene length
1314 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
yabE
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3584 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
48,629 → 49,942
The protein
Domains
G5 domain (aa 236-316) (according to UniProt)
Structure
P37546 (AlphaFold)
Expression and Regulation
Operons
Genes
yabE
Description
PubMed
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
Additional information
expression is negatively controlled by a cis-acting antisense RNA that is dependent on SigX and SigM PubMed
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yabE

2025-02-21 12:30:10

ghost

69

630f9bf86d320b35c1bc94d26618f120f69bbc67

B23FC9BE5C38BC83484E5F0890A5E654B893E46A

Additional information
the mRNA is cleaved by RNase III PubMed
Biological materials
Mutant
MGNA-B905 (yabE::erm), available at the NBRP B. subtilis, Japan
BKE00400 (ΔyabE::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAAAGCTCAGTGTCCTCTT,  downstream forward: _UP4_TAGTATATACTTATGTATTC
BKK00400 (ΔyabE::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAAAAGCTCAGTGTCCTCTT,  downstream forward: _UP4_TAGTATATACTTATGTATTC
Labs working on this gene/protein
John Helmann, Cornell University, USA Homepage
References
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FEC200568646319DBFAD3A7E20AFA1CF5185EFB2

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Time of last update: 2025-04-04 23:45:48

Author of last update: Melvin.boenninger