Talk:SubtiPathways
Discovered something unusual in the diagrams? Please leave a comment in the corresponding section!
General comments about all diagrams
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Carbon metabolism
Central carbon metabolism
Please check whether the "y" genes in the diagrams have already new names. For example, yqjH is polY1. If you are on the PolY1 page in subtiwiki and you get the link to the pathway it is not obvious whtat to look for (PolY1) is not in the list. Jörg
Utilization of different carbon sources
- (sugar between gluconate and xylose = beta-xylosides)
Cellwall
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CoA synthesis
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Folate biosynthesis
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Menaquinone
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Nitrogen and amino acid metabolism
Ammonium assimilation and glutamate metabolism (incl. glutamine and arginine)
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Alanine, glycine, serine
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Aspartate, asparagine
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Cysteine, methionine
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Histidine
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Isoleucine, valine, leucine
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Lysine, threonine
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Phenylalanine, tyrosine, tryptophan
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Proline
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Nucleotides
Gene regulation of nucleotides
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Nucleosides catabolism
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Purine metabolism
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Purines catabolism
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Purines salvage pathways
(RelA muss groß geschrieben werden)
Pyrimidines metabolism
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Stress response
- PurP muss PurS sein
- (SpoVt muss SpoVT sein)
- (sigB groß)
Sulfate assimilation
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tRNA charging
Arne, wir hatten doch eine Extra-Diskussion über die Rolle von TilS. Das fehlt hier aber! Jörg
