YvdF

From SubtiWiki
Revision as of 21:39, 29 May 2009 by Jstuelk (talk | contribs)
Jump to: navigation, search
  • Description: glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase

Gene name yvdF
Synonyms
Essential no
Product glucan 1,4-alpha-maltohydrolase, neopullulanase,
maltogenic amylase
Function starch and maltodextrin utilization
MW, pI 68 kDa, 5.178
Gene length, protein length 1767 bp, 589 aa
Immediate neighbours mdxE, yvdE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvdF context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: BbmA subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot), on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed

Database entries

  • Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed