SigD regulon

Regulator	SigD
Overview on the regulons (wiki page) Overview on the regulons (Excel file)

Genes in this regulon

• as-gdpP
• cheV
• cwlQ
• cwlS
• degR
• dltA
• dltB
• dltC
• dltD
• dltE
• epr
• flgB-flgC-fliE-fliF-fliG-fliH-fliI-fliJ-ylxF-fliK-flgD-flgE-fliL-fliM-fliY-cheY-fliZ-fliP-fliQ-fliR-flhB-flhA-flhF-flhG-cheB-cheA-cheW-cheC-cheD-sigD-swrB
• flgK
• flgL
• flgM
• flgN
• flhO
• flhP
• fliD
• fliS
• fliT
• hag
• hemAT
• lytA
• lytB
• lytC
• lytD
• lytF
• mcpA
• mcpB
• mcpC
• motA
• motB
• nfrA
• pgdS
• sigA
• sivC
• swrAA-minJ
• tlpA
• tlpB
• tlpC
• ybdO
• yfmS
• yfmT
• yjcP
• yjcQ
• yjfB

• yoaH
• yscB
• yvyC
• yvyF

• ywcH
• yxkC

newly added

• yabN-yabO
• yjcM
• xkdA
• dgcW
• rnhB-ylqG-ylqH
• ylzI
• yoyG
• cgeD-cgeE
• yqaR
• yqaS
• ytlR
• yvaQ
• yvbI
• minJ
• swrAA
• fliW
• smiA
• csrA
• yviE
• yxkH

Comments

• the SigD regulon is strongly overexpressed in a ymdB mutant (loss of bistable gene expression) PubMed
• expression of the SigD regulon is reduced upon overexpression of SlrA, this can be suppressed by mutations in remA, remB, sinR, or slrR PubMed
• expression of the SigD regulon is reduced in pnpA mutants due to reduced sigD expression PubMed
• the SigD regulon is not expressed in a rpsU mutant, this can be suppressed by inactivation of remA PubMed