RpsF

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Gene name rpsF
Synonyms
Essential no PubMed
Product ribosomal protein S6 (BS9)
Function translation
Gene expression levels in SubtiExpress: rpsF
Interactions involving this protein in SubtInteract: RpsF
MW, pI 10 kDa, 4.993
Gene length, protein length 285 bp, 95 aa
Immediate neighbours ssbA, yyaF
Sequences Protein DNA DNA_with_flanks
Genetic context
RpsF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpsF expression.png















Categories containing this gene/protein

translation, most abundant proteins

This gene is a member of the following regulons

ComK regulon, stringent response

The gene

Basic information

  • Locus tag: BSU40910

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure: 3R3T (from Bacillus anthracis, 71% identity, 97% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • ComK: transcription activation PubMed
  • Additional information:
    • the mRNA contains a structured motif in the 5' UTR upstream of the rpsF ORF that is bound by RpsF-RpsR heterodimers and may be implicated in autogenous regulation PubMed
    • belongs to the 100 most abundant proteins PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 3469 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 4039 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References