YvdF

• Description: glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
  
  

Gene name	yvdF
Synonyms
Essential	no
Product	glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
Function	starch and maltodextrin utilization
Gene expression levels in SubtiExpress: yvdF
Metabolic function and regulation of this protein in SubtiPathways: yvdF
MW, pI	68 kDa, 5.178
Gene length, protein length	1767 bp, 589 aa
Immediate neighbours	mdxE, yvdE
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

utilization of specific carbon sources, membrane proteins

The gene

Basic information

• Locus tag: BSU34620

Database entries

• BsubCyc: BSU34620

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: BbmA subfamily (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed

Database entries

• BsubCyc: BSU34620

• Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)

• UniProt: O06988

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: yvdE-yvdF-mdxE-mdxF-mdxG-yvdJ-yvdK-malL-pgcM PubMed

• Expression browser: yvdF PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Jae-Hoon Shim, Jong-Tae Park, Jung-Sun Hong, Ki Woo Kim, Myo-Jeong Kim, Jung-Hyuk Auh, Young-Wan Kim, Cheon-Seok Park, Winfried Boos, Jung-Wan Kim, Kwan-Hwa Park
Role of maltogenic amylase and pullulanase in maltodextrin and glycogen metabolism of Bacillus subtilis 168.
J Bacteriol: 2009, 191(15);4835-44
[PubMed:19465663] [WorldCat.org] [DOI] (I p)

Stefan Schönert, Sabine Seitz, Holger Krafft, Eva-Anne Feuerbaum, Iris Andernach, Gabriele Witz, Michael K Dahl
Maltose and maltodextrin utilization by Bacillus subtilis.
J Bacteriol: 2006, 188(11);3911-22
[PubMed:16707683] [WorldCat.org] [DOI] (P p)

Do-Yeon Kim, Choon-Hwan Cha, Wan-Seok Oh, Young-Jun Yoon, Jung-Wan Kim
Expression of the promoter for the maltogenic amylase gene in Bacillus subtilis 168.
J Microbiol: 2004, 42(4);319-27
[PubMed:15650689] [WorldCat.org] (P p)