YvdF

• Description: glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
  
  

Gene name	yvdF
Synonyms
Essential	no
Product	glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
Function	starch and maltodextrin utilization
Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism
MW, pI	68 kDa, 5.178
Gene length, protein length	1767 bp, 589 aa
Immediate neighbours	mdxE, yvdE
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

Categories containing this gene/protein

utilization of specific carbon sources, membrane proteins

The gene

Basic information

• Locus tag: BSU34620

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: BbmA subfamily (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization: cytoplasm (according to Swiss-Prot), on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed

Database entries

• Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)

• UniProt: O06988

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: yvdE-yvdF-mdxE-mdxF-mdxG-yvdJ-yvdK-malL-pgcM PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Jae-Hoon Shim, Jong-Tae Park, Jung-Sun Hong, Ki Woo Kim, Myo-Jeong Kim, Jung-Hyuk Auh, Young-Wan Kim, Cheon-Seok Park, Winfried Boos, Jung-Wan Kim, Kwan-Hwa Park
Role of maltogenic amylase and pullulanase in maltodextrin and glycogen metabolism of Bacillus subtilis 168.
J Bacteriol: 2009, 191(15);4835-44
[PubMed:19465663] [WorldCat.org] [DOI] (I p)

Stefan Schönert, Sabine Seitz, Holger Krafft, Eva-Anne Feuerbaum, Iris Andernach, Gabriele Witz, Michael K Dahl
Maltose and maltodextrin utilization by Bacillus subtilis.
J Bacteriol: 2006, 188(11);3911-22
[PubMed:16707683] [WorldCat.org] [DOI] (P p)

Do-Yeon Kim, Choon-Hwan Cha, Wan-Seok Oh, Young-Jun Yoon, Jung-Wan Kim
Expression of the promoter for the maltogenic amylase gene in Bacillus subtilis 168.
J Microbiol: 2004, 42(4);319-27
[PubMed:15650689] [WorldCat.org] (P p)