YwcC

• Description: transcription repressor (TetR family), controls slrA expression
  
  

Gene name	ywcC
Synonyms	ipa-33d
Essential	no
Product	transcription repressor (TetR family)
Function	control of SlrA expression
Gene expression levels in SubtiExpress: ywcC
Regulation of this protein in SubtiPathways: Biofilm
MW, pI	25 kDa, 8.466
Gene length, protein length	669 bp, 223 aa
Immediate neighbours	gtaC, slrA
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

transcription factors and their control, biofilm formation

The YwcC regulon:

• slrA

The gene

Basic information

• Locus tag: BSU38220

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P39601

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: ywcC PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Yunrong Chai, Roberto Kolter, Richard Losick
Paralogous antirepressors acting on the master regulator for biofilm formation in Bacillus subtilis.
Mol Microbiol: 2009, 74(4);876-87
[PubMed:19788541] [WorldCat.org] [DOI] (I p)

Kazuo Kobayashi
SlrR/SlrA controls the initiation of biofilm formation in Bacillus subtilis.
Mol Microbiol: 2008, 69(6);1399-410
[PubMed:18647168] [WorldCat.org] [DOI] (I p)