CdaR

• Description: unknown
  
  

Gene name	ybbR
Synonyms
Essential	no
Product	unknown
Function	unknown
Metabolic function and regulation of this protein in SubtiPathways: Murein recycling
MW, pI	52 kDa, 4.719
Gene length, protein length	1449 bp, 483 aa
Immediate neighbours	ybbP, glmM
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

Categories containing this gene/protein

proteins of unknown function

The gene

Basic information

• Locus tag: BSU01760

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: O34659

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: ybbP-ybbR-glmM-glmS

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information: the ybbP-ybbR part of the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Adam W Barb, John R Cort, Jayaraman Seetharaman, Scott Lew, Hsiau-Wei Lee, Thomas Acton, Rong Xiao, Michael A Kennedy, Liang Tong, Gaetano T Montelione, James H Prestegard
Structures of domains I and IV from YbbR are representative of a widely distributed protein family.
Protein Sci: 2011, 20(2);396-405
[PubMed:21154411] [WorldCat.org] [DOI] (I p)

G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008] [WorldCat.org] [DOI] (P p)