YrrO

From SubtiWiki
Revision as of 09:56, 17 April 2014 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: similar to protease

Gene name yrrO
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yrrO
Metabolic function and regulation of this protein in SubtiPathways:
yrrO
MW, pI 47 kDa, 4.852
Gene length, protein length 1266 bp, 422 aa
Immediate neighbours udk, yrrN
Sequences Protein DNA DNA_with_flanks
Genetic context
YrrO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrrO expression.png




























Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27340

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase U32 family (according to Swiss-Prot)
  • Paralogous protein(s): YrrN

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 29 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 611 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References