Talk:SubtiPathways

Discovered something unusual in the diagrams? Please leave a comment in the corresponding section!

General comments about all diagrams

• There seem to be some compatibility problems using Google Chrome. Nonetheless, Mozilla Firefox, Netscape, Microsoft Explorer, Safari, and Opera are working properly.
• Comments in brackets have been changed in the original files, but have not been uploaded yet.

Carbon metabolism

Central carbon metabolism

Please check whether the "y" genes in the diagrams have already new names. For example, yqjH is polY1. If you are on the PolY1 page in subtiwiki and you get the link to the pathway it is not obvious whtat to look for (PolY1) is not in the list. Jörg

Utilization of different carbon sources

• (sugar between gluconate and xylose = beta-xylosides)

Cellwall

write comments here

CoA synthesis

write comments here

Folate biosynthesis

write comments here

Menaquinone

write comments here

Nitrogen and amino acid metabolism

Ammonium assimilation and glutamate metabolism (incl. glutamine and arginine)

write comments here

Alanine, glycine, serine

write comments here

Aspartate, asparagine

write comments here

Cysteine, methionine

write comments here

Histidine

write comments here

Isoleucine, valine, leucine

write comments here

Lysine, threonine

write comments here

Phenylalanine, tyrosine, tryptophan

write comments here

Proline

write comments here

Nucleotides

Gene regulation of nucleotides

write comments here

Nucleosides catabolism

write comments here

Purine metabolism

write comments here

Purines catabolism

write comments here

Purines salvage pathways

(RelA muss groß geschrieben werden)

Pyrimidines metabolism

write comments here

Stress response

• PurP muss PurS sein
• SpoVt muss SpoVT sein
• sigB groß

Sulfate assimilation

write comments here

tRNA charging

Arne, wir hatten doch eine Extra-Diskussion über die Rolle von TilS. Das fehlt hier aber! Jörg