Difference between revisions of "YvdF"
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* '''Interactions:''' | * '''Interactions:''' | ||
− | * '''Localization:''' cytoplasm (according to Swiss-Prot) | + | * '''Localization:''' cytoplasm (according to Swiss-Prot), on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores [http://www.ncbi.nlm.nih.gov/sites/entrez/19465663 PubMed] |
=== Database entries === | === Database entries === |
Revision as of 17:13, 28 May 2009
- Description: glucan 1,4-alpha-maltohydrolase, neopullulanase
Gene name | yvdF |
Synonyms | |
Essential | no |
Product | glucan 1,4-alpha-maltohydrolase, neopullulanase |
Function | starch and maltodextrin utilization |
MW, pI | 68 kDa, 5.178 |
Gene length, protein length | 1767 bp, 589 aa |
Immediate neighbours | mdxE, yvdE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: BbmA subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot), on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed
Database entries
- Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)
- Swiss prot entry: O06988
- KEGG entry: BSU34620
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed