Difference between revisions of "GcvPB"

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=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:''' Glycine + H-protein-lipoyllysine = H-protein-S-aminomethyldihydrolipoyllysine + CO<sub>2</sub> (according to Swiss-Prot)
  
 
* '''Protein family:''' C-terminal subunit subfamily (according to Swiss-Prot)
 
* '''Protein family:''' C-terminal subunit subfamily (according to Swiss-Prot)

Revision as of 00:58, 24 May 2009

  • Description: glycine decarboxylase (subunit 2)

Gene name gcvPB
Synonyms yqhK, gcvP
Essential no
Product glycine decarboxylase (subunit 2)
Function glycine utilization
MW, pI 54 kDa, 5.283
Gene length, protein length 1464 bp, 488 aa
Immediate neighbours yqhL, gcvPA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GcvPB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Glycine + H-protein-lipoyllysine = H-protein-S-aminomethyldihydrolipoyllysine + CO2 (according to Swiss-Prot)
  • Protein family: C-terminal subunit subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane (according to Swiss-Prot)

Database entries

  • Structure:

Additional information

Expression and regulation

  • Regulation: repressed by casamino acids PubMed , induced by glycine PubMed
  • Regulatory mechanism: induction requires a co-operatively acting riboswitch PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Mäder et al. (2002) Transcriptome and Proteome Analysis of Bacillus subtilis Gene Expression Modulated by Amino Acid Availability. J. Bacteriol 184: 1844288-4295 PubMed
  2. Mandal M, Lee M, Barrick JE, Weinberg Z, Emilsson GM, Ruzzo WL, Breaker RR (2004) A glycine-dependent riboswitch that uses cooperative binding to control gene expression. Science 306: 275-279. PubMed
  3. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed