Difference between revisions of "SodF"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[sqhC]]-[[sodF]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigE]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
| − | * '''Regulation:''' | + | * '''Regulation:''' expressed during sporulation in the mother cell [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 18:36, 21 May 2009
- Description: superoxide dismutase
| Gene name | sodF |
| Synonyms | |
| Essential | no |
| Product | superoxide dismutase |
| Function | detoxification of oxygen radicals |
| MW, pI | 33 kDa, 6.17 |
| Gene length, protein length | 843 bp, 281 aa |
| Immediate neighbours | sqhC, yocR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: terpene cyclase/mutase family (according to Swiss-Prot)
- Paralogous protein(s): SodA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- Swiss prot entry: O35023
- KEGG entry: BSU19330
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed during sporulation in the mother cell PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
