Difference between revisions of "DnaB"

From SubtiWiki
Jump to: navigation, search
Line 72: Line 72:
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:''' [[DnaB]]-[[DnaI]],  [[DnaB]]-[[DnaC]],  [[DnaD]]-[[DnaB]],  [[DnaB]]-[[DnaX]],  [[DnaB]]-[[PriA]],  [[DnaB]]-[[DnaI]],  [[DnaB]]-[[DnaC]],  [[DnaD]]-[[DnaB]],  [[DnaB]]-[[DnaX]],  [[DnaB]]-[[PriA]],  [[DnaB]]-[[DnaI]],  [[DnaB]]-[[DnaC]],  [[DnaD]]-[[DnaB]],  [[DnaB]]-[[DnaX]],  [[DnaX]]-[[DnaB]] [http://www.ncbi.nlm.nih.gov/sites/entrez/14757052 PubMed]
+
* '''Interactions:''' [[DnaB]]-[[PriA]],  [[DnaB]]-[[DnaI]],  [[DnaB]]-[[DnaC]],  [[DnaD]]-[[DnaB]],  [[DnaB]]-[[DnaX]],  [[DnaB]]-[[PriA]],  [[DnaB]]-[[DnaI]],  [[DnaB]]-[[DnaC]],  [[DnaD]]-[[DnaB]],  [[DnaB]]-[[DnaX]],  [[DnaB]]-[[PriA]],  [[DnaB]]-[[DnaI]],  [[DnaB]]-[[DnaC]],  [[DnaD]]-[[DnaB]],  [[DnaB]]-[[DnaX]],  [[DnaX]]-[[DnaB]] [http://www.ncbi.nlm.nih.gov/sites/entrez/14757052 PubMed]
  
 
* '''Localization:''' Membrane-proximal (Spotty) [http://www.ncbi.nlm.nih.gov/sites/entrez/16479537 PubMed] forms foci, close to oriC [http://www.ncbi.nlm.nih.gov/sites/entrez/10844689 PubMed]
 
* '''Localization:''' Membrane-proximal (Spotty) [http://www.ncbi.nlm.nih.gov/sites/entrez/16479537 PubMed] forms foci, close to oriC [http://www.ncbi.nlm.nih.gov/sites/entrez/10844689 PubMed]

Revision as of 13:45, 28 April 2009

  • Description: initiation of chromosome replication/ membrane attachment protein

Gene name dnaB
Synonyms
Essential yes PubMed
Product initiation of chromosome replication/ membrane attachment protein
Function DNA replication
MW, pI 54 kDa, 5.278
Gene length, protein length 1416 bp, 472 aa
Immediate neighbours dnaI, ytcG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
DnaB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: Membrane-proximal (Spotty) PubMed forms foci, close to oriC PubMed

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6: 2135-2146. PubMed
  2. Haroniti et al. (2004) The clamp-loader-helicase interaction in Bacillus. Atomic force microscopy reveals the structural organisation of the DnaB-tau complex in Bacillus.J. Mol. Biol. 336: 381-393. PubMed
  3. Imai et al. (2000) Subcellular localization of Dna-initiation proteins of Bacillus subtilis: evidence that chromosome replication begins at either edge of the nucleoids. Mol. Microbiol. 36: 1037-1048. PubMed