Difference between revisions of "MenD"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytxM]]'', ''[[menF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytxM]]'', ''[[menF]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/menD_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15060&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/menD_protein.txt Protein sequence]'''
 
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:menD_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:menD_context.gif]]

Revision as of 01:31, 17 April 2009

  • Description: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-oxoglutarate decarboxylase

Gene name menD
Synonyms
Essential yes PubMed
Product 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
synthase / 2-oxoglutarate decarboxylase
Function biosynthesis of menaquinone
MW, pI 63 kDa, 5.655
Gene length, protein length 1740 bp, 580 aa
Immediate neighbours ytxM, menF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
MenD context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed