Difference between revisions of "PaiA"

From SubtiWiki
Jump to: navigation, search
Line 20: Line 20:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[paiB]]'', ''[[yutM]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[paiB]]'', ''[[yutM]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/paiA_nucleotide.txt    Gene sequence      (+200bp)  ]'''
+
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15205&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/paiA_protein.txt Protein sequence]'''
 
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:paiA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:paiA_context.gif]]

Revision as of 01:22, 17 April 2009

  • Description: write here

Gene name paiA
Synonyms
Essential no
Product transcriptional regulator
Function negative regulation of sporulation, septation and
degradative enzyme genes (aprE, nprE, phoA, sacB)
MW, pI 19 kDa, 5.018
Gene length, protein length 516 bp, 172 aa
Immediate neighbours paiB, yutM
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
PaiA context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed