Difference between revisions of "CspR"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhbB]]'', ''[[yhbD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yhbB]]'', ''[[yhbD]]''
 
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/cspR_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12721&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/cspR_protein.txt Protein sequence]'''
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|-
 
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|colspan="2" style="background:#FAF8CC;color:#FF0000" align="center" | '''Caution: The sequence for this gene in SubtiList contains errors
 
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:cspR_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cspR_context.gif]]

Revision as of 23:56, 16 April 2009

  • Description: rRNA methylase homolog

Gene name cspR
Synonyms ygaR
Essential yes PubMed
Product rRNA methylase homolog
Function translation
MW, pI 18 kDa, 6.054
Gene length, protein length 480 bp, 160 aa
Immediate neighbours yhbB, yhbD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CspR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed