Difference between revisions of "SodA"

From SubtiWiki
Jump to: navigation, search
(Basic information/ Evolution)
Line 1: Line 1:
* '''Description:''' write here <br/><br/>
+
* '''Description:''' superoxide dismutase, general stress protein <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || superoxide dismutase (EC 1.15.1.1)
+
|style="background:#ABCDEF;" align="center"| '''Product''' || superoxide dismutase
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' ||  
+
|style="background:#ABCDEF;" align="center"|'''Function''' || detoxification of oxygen radicals
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 22 kDa, 5.203   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 22 kDa, 5.203   

Revision as of 09:02, 23 March 2009

  • Description: superoxide dismutase, general stress protein

Gene name sodA
Synonyms yqgD
Essential no
Product superoxide dismutase
Function detoxification of oxygen radicals
MW, pI 22 kDa, 5.203
Gene length, protein length 606 bp, 202 aa
Immediate neighbours yqgE, yqgC
Gene sequence (+200bp) Protein sequence
Genetic context
SodA context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): SodF

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation on Thr-34 AND Thr-70 PubMed
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Macek et al. (2007) The serine/ threonine/ tyrosine phosphoproteome of the model bacterium Bacillus subtilis. Mol. Cell. Proteomics 6: 697-707 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed