Difference between revisions of "ConQ"
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| − | * '''Description:''' | + | * '''Description:''' coupling protein, part of the type IV secretion system for DNA transfer <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || coupling protein, part of the type IV secretion system for DNA transfer |
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| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || conjugative transfer of ICEBs1 |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04860 ydcQ] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04860 ydcQ] | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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=References= | =References= | ||
| − | <pubmed> 23326247 </pubmed> | + | <pubmed> 23326247 26013486</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:05, 28 May 2015
- Description: coupling protein, part of the type IV secretion system for DNA transfer
| Gene name | ydcQ |
| Synonyms | conQ |
| Essential | no |
| Product | coupling protein, part of the type IV secretion system for DNA transfer |
| Function | conjugative transfer of ICEBs1 |
| Gene expression levels in SubtiExpress: ydcQ | |
| MW, pI | 54 kDa, 9.277 |
| Gene length, protein length | 1440 bp, 480 aa |
| Immediate neighbours | helP, nicK |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
[None Expression at a glance] PubMed
| |
Contents
Categories containing this gene/protein
mobile genetic elements, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04860
Phenotypes of a mutant
Database entries
- BsubCyc: BSU04860
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU04860
- Structure:
- UniProt: P96634
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Cori T Leonetti, Matt A Hamada, Stephanie J Laurer, Matthew P Broulidakis, Kyle J Swerdlow, Catherine A Lee, Alan D Grossman, Melanie B Berkmen
Critical Components of the Conjugation Machinery of the Integrative and Conjugative Element ICEBs1 of Bacillus subtilis.
J Bacteriol: 2015, 197(15);2558-67
[PubMed:26013486]
[WorldCat.org]
[DOI]
(I p)
Jacob Thomas, Catherine A Lee, Alan D Grossman
A conserved helicase processivity factor is needed for conjugation and replication of an integrative and conjugative element.
PLoS Genet: 2013, 9(1);e1003198
[PubMed:23326247]
[WorldCat.org]
[DOI]
(I p)
