Difference between revisions of "RpmA"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 282 bp, 94 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 282 bp, 94 aa  
 
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spo0B]]'', ''[[ysxB]]''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spo0B]]'', ''[[prp]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27940 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27940 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27940 DNA_with_flanks]
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27940 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27940 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27940 DNA_with_flanks]

Revision as of 12:42, 10 December 2014

Gene name rpmA
Synonyms
Essential yes PubMed
Product ribosomal protein L27 (BL24)
Function translation
Gene expression levels in SubtiExpress: rpmA
Interactions involving this protein in SubtInteract: RpmA
MW, pI 10 kDa, 10.764
Gene length, protein length 282 bp, 94 aa
Immediate neighbours spo0B, prp
Sequences Protein DNA DNA_with_flanks
Genetic context
RpmA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmA expression.png















Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27940

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

  • the protein is significantly underrepresented in 45S assembly intermediates that accumulate upon depletion of RbgA PubMed

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 650 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 1644 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References