Difference between revisions of "YclM"

From SubtiWiki
Jump to: navigation, search
Line 121: Line 121:
  
 
* '''Additional information:'''
 
* '''Additional information:'''
 +
** number of protein molecules per cell (minimal medium with glucose and ammonium): 78 {{PubMed|24696501}}
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:03, 17 April 2014

  • Description: aspartokinase III

Gene name yclM
Synonyms
Essential no
Product aspartokinase III
Function unknown
Gene expression levels in SubtiExpress: yclM
Metabolic function and regulation of this protein in SubtiPathways:
yclM
MW, pI 49 kDa, 4.783
Gene length, protein length 1362 bp, 454 aa
Immediate neighbours yczN, yclN
Sequences Protein DNA DNA_with_flanks
Genetic context
YclM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YclM expression.png




























Categories containing this gene/protein

biosynthesis/ acquisition of amino acids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU03790

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + L-aspartate = ADP + 4-phospho-L-aspartate (according to Swiss-Prot)
  • Protein family: aspartokinase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: inhibited by the simultaneous presence of threonine and lysine PubMed

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon: yclM (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 78 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications