Difference between revisions of "YwpB"
Line 57: | Line 57: | ||
* essential {{PubMed|23109554}} | * essential {{PubMed|23109554}} | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU36370&redirect=T BSU36370] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
Line 94: | Line 95: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU36370&redirect=T BSU36370] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3D6X 3D6X] (from ''Campylobacter jejuni'', 45% identity, 67% similarity) {{PubMed|19280690}} | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3D6X 3D6X] (from ''Campylobacter jejuni'', 45% identity, 67% similarity) {{PubMed|19280690}} |
Revision as of 15:00, 2 April 2014
- Description: β-hydroxyacyl-(acyl carrier protein) dehydratase
Gene name | ywpB |
Synonyms | fabZ |
Essential | yes PubMed |
Product | β-hydroxyacyl-ACP dehydratase |
Function | fatty acid biosynthesis |
Gene expression levels in SubtiExpress: ywpB | |
Metabolic function and regulation of this protein in SubtiPathways: ywpB | |
MW, pI | 14 kDa, 9.36 |
Gene length, protein length | 396 bp, 132 aa |
Immediate neighbours | mscL, rapD |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
biosynthesis of lipids, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36370
Phenotypes of a mutant
- essential PubMed
Database entries
- BsubCyc: BSU36370
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: FabZ subfamily (according to Swiss-Prot)
- Paralogous protein(s): YcsD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU36370
- UniProt: P94584
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed