Difference between revisions of "YvdF"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34620&redirect=T BSU34620] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34620&redirect=T BSU34620] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1J0J 1J0J] (from G. stearothermophilus, 56% identity, complex with maltotetraose), [http://www.rcsb.org/pdb/explore.do?structureId=1J0H 1J0H] (from G. stearothermophilus, 56% identity) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1J0J 1J0J] (from G. stearothermophilus, 56% identity, complex with maltotetraose), [http://www.rcsb.org/pdb/explore.do?structureId=1J0H 1J0H] (from G. stearothermophilus, 56% identity) | ||
Revision as of 14:51, 2 April 2014
- Description: glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
| Gene name | yvdF |
| Synonyms | |
| Essential | no |
| Product | glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase |
| Function | starch and maltodextrin utilization |
| Gene expression levels in SubtiExpress: yvdF | |
| Metabolic function and regulation of this protein in SubtiPathways: yvdF | |
| MW, pI | 68 kDa, 5.178 |
| Gene length, protein length | 1767 bp, 589 aa |
| Immediate neighbours | mdxE, yvdE |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34620
Phenotypes of a mutant
Database entries
- BsubCyc: BSU34620
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: BbmA subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed
Database entries
- BsubCyc: BSU34620
- Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)
- UniProt: O06988
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
