Difference between revisions of "PbpD"

From SubtiWiki
Jump to: navigation, search
Line 61: Line 61:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU31490&redirect=T BSU31490]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pbpD-yuxK.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pbpD-yuxK.html]
Line 99: Line 100:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU31490&redirect=T BSU31490]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:37, 2 April 2014

Gene name pbpD
Synonyms
Essential no
Product penicillin-binding protein 4
Function bifunctional glucosyltransferase/ transpeptidase
Gene expression levels in SubtiExpress: pbpD
Interactions involving this protein in SubtInteract: PbpD
MW, pI 70 kDa, 9.307
Gene length, protein length 1872 bp, 624 aa
Immediate neighbours yuxJ, yuxK
Sequences Protein DNA DNA_with_flanks
Genetic context
PbpD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PbpD expression.png
























Categories containing this gene/protein

cell wall synthesis, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU31490

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References