Difference between revisions of "Apt"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27610&redirect=T BSU27610]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yrvE-apt.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yrvE-apt.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27610&redirect=T BSU27610]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2DY0 2DY0] (from ''Escherichia coli k12'', 56% identity, 66% similarity)
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2DY0 2DY0] (from ''Escherichia coli k12'', 56% identity, 66% similarity)

Revision as of 14:22, 2 April 2014

Gene name apt
Synonyms
Essential no
Product adenine phosphoribosyltransferase
Function purine salvage and interconversion
Gene expression levels in SubtiExpress: apt
Metabolic function and regulation of this protein in SubtiPathways:
apt
MW, pI 18 kDa, 4.701
Gene length, protein length 510 bp, 170 aa
Immediate neighbours relA, yrvE
Sequences Protein DNA DNA_with_flanks
Genetic context
Apt context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Apt expression.png




























Categories containing this gene/protein

biosynthesis/ acquisition of nucleotides, universally conserved proteins, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27610

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate (according to Swiss-Prot)
  • Protein family: purine/pyrimidine phosphoribosyltransferase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-85 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2DY0 (from Escherichia coli k12, 56% identity, 66% similarity)
  • KEGG entry: [3]

Additional information

universally conserved protein

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References