Difference between revisions of "SigV"
Line 58: | Line 58: | ||
** increased sensitivity to lysozyme, this can be suppressed by overexpression of'' [[oatA]]'' {{PubMed|21856855}} | ** increased sensitivity to lysozyme, this can be suppressed by overexpression of'' [[oatA]]'' {{PubMed|21856855}} | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27120&redirect=T BSU27120] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sigV-yrhM.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sigV-yrhM.html] | ||
Line 96: | Line 97: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27120&redirect=T BSU27120] | ||
* '''Structure:''' | * '''Structure:''' |
Revision as of 14:20, 2 April 2014
- Description: RNA polymerase ECF-type sigma factor SigV
Gene name | sigV |
Synonyms | |
Essential | no |
Product | RNA polymerase ECF-type sigma factor SigV |
Function | response to lysozyme |
Gene expression levels in SubtiExpress: sigV | |
Interactions involving this protein in SubtInteract: SigV | |
MW, pI | 19 kDa, 9.037 |
Gene length, protein length | 498 bp, 166 aa |
Immediate neighbours | yrhO, rsiV |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
transcription, sigma factors and their control, cell envelope stress proteins (controlled by SigM, V, W, X, Y)
This gene is a member of the following regulons
The SigV regulon:
The gene
Basic information
- Locus tag: BSU27120
Phenotypes of a mutant
Database entries
- BsubCyc: BSU27120
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ECF subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
Database entries
- BsubCyc: BSU27120
- Structure:
- UniProt: O05404
- KEGG entry: [3]
- E.C. number:
Additional information
- Expression of the SigV regulon in increased in ugtP mutants PubMed
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Thomas Wiegert, University of Bayreuth, Germany Homepage
Your additional remarks
References