Difference between revisions of "SigV"

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** increased sensitivity to lysozyme, this can be suppressed by overexpression of'' [[oatA]]'' {{PubMed|21856855}}
 
** increased sensitivity to lysozyme, this can be suppressed by overexpression of'' [[oatA]]'' {{PubMed|21856855}}
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27120&redirect=T BSU27120]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sigV-yrhM.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sigV-yrhM.html]
Line 96: Line 97:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27120&redirect=T BSU27120]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:20, 2 April 2014

Gene name sigV
Synonyms
Essential no
Product RNA polymerase ECF-type sigma factor SigV
Function response to lysozyme
Gene expression levels in SubtiExpress: sigV
Interactions involving this protein in SubtInteract: SigV
MW, pI 19 kDa, 9.037
Gene length, protein length 498 bp, 166 aa
Immediate neighbours yrhO, rsiV
Sequences Protein DNA DNA_with_flanks
Genetic context
SigV context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SigV expression.png















Categories containing this gene/protein

transcription, sigma factors and their control, cell envelope stress proteins (controlled by SigM, V, W, X, Y)

This gene is a member of the following regulons

SigV regulon

The SigV regulon:

The gene

Basic information

  • Locus tag: BSU27120

Phenotypes of a mutant

    • increased sensitivity to lysozyme, this can be suppressed by overexpression of oatA PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ECF subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Thomas Wiegert, University of Bayreuth, Germany Homepage

Your additional remarks

References