Difference between revisions of "NagB"
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
− | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
− | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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* '''Regulation:''' | * '''Regulation:''' | ||
− | ** induced in the presence of N-acetylglucosamine ([[NagR]]) {{PubMed|21602348}} | + | ** induced in the presence of N-acetylglucosamine ([[NagR]]) {{PubMed|24673833,21602348}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
− | ** [[NagR]]: transcription repression {{PubMed|21602348}} | + | ** [[NagR]]: transcription repression {{PubMed|24673833,21602348}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
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=References= | =References= | ||
− | <pubmed>6174502,15755726 21821766 21602348 23667565 23876412</pubmed> | + | <pubmed>6174502,15755726 21821766 21602348 23667565 24673833,23876412</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 10:51, 31 March 2014
- Description: glucosamine-6-phosphate deaminase
Gene name | nagB |
Synonyms | |
Essential | no |
Product | glucosamine-6-phosphate deaminase |
Function | N-acetylglucosamine utilization |
Gene expression levels in SubtiExpress: nagB | |
Metabolic function and regulation of this protein in SubtiPathways: nagB | |
MW, pI | 26 kDa, 5.717 |
Gene length, protein length | 726 bp, 242 aa |
Immediate neighbours | nagA, nagR |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall degradation/ turnover, utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU35020
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- A mutation was found in this gene after evolution under relaxed selection for sporulation PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 (according to Swiss-Prot)
- Protein family: NagB subfamily (according to Swiss-Prot)
- Paralogous protein(s): GamA
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- UniProt: O35000
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References