Difference between revisions of "AtpG"

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* '''Description:''' ATP synthase (subunit gamma) <br/><br/>
+
* '''Description:''' [[ATP synthase]], part of the F1 complex (subunit gamma) <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || ATP synthase (subunit gamma))
+
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ATP synthase]] (subunit gamma))
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || ATP synthesis  
+
|style="background:#ABCDEF;" align="center"|'''Function''' || [[ATP synthesis]]
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU36820 atpG]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU36820 atpG]
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/AtpG AtpG]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 6.642   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 6.642   
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<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
<br/><br/>
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[ATP synthesis]]}}
+
{{SubtiWiki category|[[ATP synthesis]]}},
 +
{{SubtiWiki category|[[membrane proteins]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
 +
** [[AtpB|A]](1)-[[AtpF|B]](2)-[[AtpE|C]](12) - [[AtpA|alpha]](3)-[[AtpD|beta]](3)-[[AtpG|gamma]]-[[AtpH|delta]]-[[AtpC|epsilon]]
  
 
* '''[[Localization]]:'''
 
* '''[[Localization]]:'''
 +
** membrane, peripheral via theF0 complex
  
 
=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/101/motm.do?momID=72&evtc=Suggest&evta=Moleculeof%20the%20Month&evtl=OtherOptions see here an overview on ATPase structure]
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P37810 P37810]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P37810 P37810]
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=atpG_3782938_3783801_-1 atpG] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=atpG_3782938_3783801_-1 atpG] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 138: Line 139:
  
 
=References=
 
=References=
 
+
== Reviews ==
 +
<pubmed> 23356252 23341301, 23267178 22822068 21524994 19489730 17208001 16730323 </pubmed>
 +
== Original publications ==
 
<pubmed>7961438,, </pubmed>
 
<pubmed>7961438,, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:01, 11 August 2013

  • Description: ATP synthase, part of the F1 complex (subunit gamma)

Gene name atpG
Synonyms
Essential no
Product ATP synthase (subunit gamma))
Function ATP synthesis
Gene expression levels in SubtiExpress: atpG
Interactions involving this protein in SubtInteract: AtpG
MW, pI 31 kDa, 6.642
Gene length, protein length 861 bp, 287 aa
Immediate neighbours atpD, atpA
Sequences Protein DNA DNA_with_flanks
Genetic context
AtpG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AtpG expression.png















Categories containing this gene/protein

ATP synthesis, membrane proteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU36820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP synthesis see a video
  • Protein family: ATPase gamma chain family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications