Difference between revisions of "PdxS"
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=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2NV2 2NV2] [[PdxS]]-[[PdxT]] complex | + | * '''Structure:''' |
| + | ** [http://www.rcsb.org/pdb/explore.do?structureId=2NV1 2NV1] [[PdxS]] | ||
| + | ** [http://www.rcsb.org/pdb/explore.do?structureId=2NV2 2NV2] [[PdxS]]-[[PdxT]] complex | ||
* '''UniProt:''' [http://www.uniprot.org/uniprot/P37527 P37527] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P37527 P37527] | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[pdxS]]-[[pdxT]]'' | + | * '''Operon:''' ''[[pdxS]]-[[pdxT]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pdxS_19062_19946_1 pdxS] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pdxS_19062_19946_1 pdxS] {{PubMed|22383849}} | ||
Revision as of 07:53, 9 July 2013
- Description: pyridoxal-5'-phosphate synthase (synthase domain)
| Gene name | pdxS |
| Synonyms | yaaD |
| Essential | no |
| Product | pyridoxal-5'-phosphate synthase (synthase domain) |
| Function | pyridoxal-5'-phosphate biosynthesis |
| Gene expression levels in SubtiExpress: pdxS | |
| Interactions involving this protein in SubtInteract: PdxS | |
| MW, pI | 31 kDa, 5.085 |
| Gene length, protein length | 882 bp, 294 aa |
| Immediate neighbours | dacA, pdxT |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis of cofactors, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00110
Phenotypes of a mutant
auxotrophic for pyridoxal 5'-phosphate PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: pdxS/SNZ family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: P37527
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
