Difference between revisions of "YpwA"

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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:''' dimer [http://www.ncbi.nlm.nih.gov/sites/entrez/19544567 PubMed]
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* '''[[SubtInteract|Interactions]]:'''
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** dimer [http://www.ncbi.nlm.nih.gov/sites/entrez/19544567 PubMed]
  
* '''Localization:''' cytoplasm (according to Swiss-Prot)
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* '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypwA_2320355_2321860_-1 ypwA] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypwA_2320355_2321860_-1 ypwA] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 19:58, 7 July 2013

  • Description: carboxypeptidase, metalloprotease

Gene name ypwA
Synonyms
Essential no
Product M32 carboxypeptidase
Function unknown
Gene expression levels in SubtiExpress: ypwA
MW, pI 58 kDa, 4.77
Gene length, protein length 1503 bp, 501 aa
Immediate neighbours xpt, kdgT
Sequences Protein DNA DNA_with_flanks
Genetic context
YpwA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YpwA expression.png















Categories containing this gene/protein

proteolysis

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22080

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: M32 carboxypeptidase
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ypwA (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Marianne M Lee, Clara E Isaza, James D White, Rita P-Y Chen, George F-C Liang, Hannah T-F He, Sunney I Chan, Michael K Chan
Insight into the substrate length restriction of M32 carboxypeptidases: characterization of two distinct subfamilies.
Proteins: 2009, 77(3);647-57
[PubMed:19544567] [WorldCat.org] [DOI] (I p)